Lineage for d5n88e1 (5n88 E:347-424)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1997956Fold a.48: N-cbl like [47667] (5 superfamilies)
    4 helices; bundle, left-handed twist; left-handed superhelix
  4. 1998036Superfamily a.48.4: HIV integrase-binding domain [140576] (1 family) (S)
  5. 1998037Family a.48.4.1: HIV integrase-binding domain [140577] (2 protein domains)
    N-terminal part of PfamB PB012949
  6. 1998043Protein automated matches [191076] (1 species)
    not a true protein
  7. 1998044Species Human (Homo sapiens) [TaxId:9606] [188992] (4 PDB entries)
  8. 2299836Domain d5n88e1: 5n88 E:347-424 [343137]
    Other proteins in same PDB: d5n88a_, d5n88e2, d5n88h_
    automated match to d1z9ea1

Details for d5n88e1

PDB Entry: 5n88 (more details), 1.7 Å

PDB Description: crystal structure of antibody bound to viral protein
PDB Compounds: (E:) PC4 and SFRS1-interacting protein

SCOPe Domain Sequences for d5n88e1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5n88e1 a.48.4.1 (E:347-424) automated matches {Human (Homo sapiens) [TaxId: 9606]}
smdsrlqrihaeiknslkidnldvnrciealdelaslqvtmqqaqkhtemittlkkirrf
kvsqvimekstmlynkfk

SCOPe Domain Coordinates for d5n88e1:

Click to download the PDB-style file with coordinates for d5n88e1.
(The format of our PDB-style files is described here.)

Timeline for d5n88e1:

  • d5n88e1 appears in periodic updates to SCOPe 2.06 starting on 2017-12-21