SCOPe 2.08: Domain d5n88e1: 5n88 E:347-424

Lineage for d5n88e1 (5n88 E:347-424)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.48: N-cbl like [47667] (5 superfamilies)
   4 helices; bundle, left-handed twist; left-handed superhelix

4. Superfamily a.48.4: HIV integrase-binding domain [140576] (2 families)

5. Family a.48.4.1: HIV integrase-binding domain [140577] (2 proteins)
   N-terminal part of PfamB PB012949

6. Protein automated matches [191076] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188992] (6 PDB entries)

8. Domain d5n88e1: 5n88 E:347-424 [343137]
   Other proteins in same PDB: d5n88a_, d5n88e2, d5n88h_
   automated match to d1z9ea1

Details for d5n88e1

PDB Entry: 5n88, 1.7 Å

PDB Description: crystal structure of antibody bound to viral protein

PDB Compounds: (E:) PC4 and SFRS1-interacting protein

SCOPe Domain Sequences for d5n88e1:

Sequence; same for both SEQRES and ATOM records:

>d5n88e1 a.48.4.1 (E:347-424) automated matches {Human (Homo sapiens) [TaxId: 9606]}
smdsrlqrihaeiknslkidnldvnrciealdelaslqvtmqqaqkhtemittlkkirrf
kvsqvimekstmlynkfk

Timeline for d5n88e1:

• d5n88e1 first appeared in SCOPe 2.06
  
• d5n88e1 appears in SCOPe 2.07