Lineage for d5m81c_ (5m81 C:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2182898Fold d.86: eIF4e-like [55417] (1 superfamily)
    beta(2)-alpha-beta(2)-alpha-beta(2)-alpha-beta-2; 2 layers: alpha/beta; antiparallel sheet: 21356478
  4. 2182899Superfamily d.86.1: eIF4e-like [55418] (3 families) (S)
  5. 2182900Family d.86.1.1: Translation initiation factor eIF4e [55419] (2 protein domains)
    automatically mapped to Pfam PF01652
  6. 2182901Protein Translation initiation factor eIF4e [55420] (3 species)
    messenger RNA 5' cap-binding protein
  7. 2182928Species Mouse (Mus musculus) [TaxId:10090] [55421] (15 PDB entries)
  8. 2299696Domain d5m81c_: 5m81 C: [342997]
    automated match to d1l8bb_
    protein/RNA complex; complexed with 7l2, gol

Details for d5m81c_

PDB Entry: 5m81 (more details), 1.9 Å

PDB Description: translation initiation factor 4e in complex with (sp)-ipr-m7gppspg mrna 5' cap analog
PDB Compounds: (C:) eukaryotic translation initiation factor 4e

SCOPe Domain Sequences for d5m81c_:

Sequence, based on SEQRES records: (download)

>d5m81c_ d.86.1.1 (C:) Translation initiation factor eIF4e {Mouse (Mus musculus) [TaxId: 10090]}
ehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcdy
slfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvcg
avvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatksgstt
knrfvv

Sequence, based on observed residues (ATOM records): (download)

>d5m81c_ d.86.1.1 (C:) Translation initiation factor eIF4e {Mouse (Mus musculus) [TaxId: 10090]}
ehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcdy
slfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvcg
avvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtknrfvv

SCOPe Domain Coordinates for d5m81c_:

Click to download the PDB-style file with coordinates for d5m81c_.
(The format of our PDB-style files is described here.)

Timeline for d5m81c_:

  • d5m81c_ appears in periodic updates to SCOPe 2.06 starting on 2017-12-21