Lineage for d6ap4p2 (6ap4 P:121-260)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2193533Fold d.131: DNA clamp [55978] (1 superfamily)
    contains two helices and two beta sheets
    duplication: fold has internal pseudo two-fold symmetry
  4. 2193534Superfamily d.131.1: DNA clamp [55979] (3 families) (S)
  5. 2193902Family d.131.1.0: automated matches [227185] (1 protein)
    not a true family
  6. 2193903Protein automated matches [226907] (20 species)
    not a true protein
  7. 2299640Species Acinetobacter baumannii [TaxId:470] [342941] (1 PDB entry)
  8. 2299664Domain d6ap4p2: 6ap4 P:121-260 [342965]
    Other proteins in same PDB: d6ap4a4, d6ap4b4, d6ap4c4, d6ap4d4, d6ap4e4, d6ap4f4, d6ap4g4, d6ap4h4, d6ap4i4, d6ap4j4, d6ap4l4, d6ap4m4, d6ap4n4, d6ap4o4, d6ap4p4
    automated match to d4tr8a2
    complexed with mg

Details for d6ap4p2

PDB Entry: 6ap4 (more details), 2.95 Å

PDB Description: crystal structure of the dna polymerase iii subunit beta from acinetobacter baumannii
PDB Compounds: (P:) DNA polymerase III subunit beta

SCOPe Domain Sequences for d6ap4p2:

Sequence, based on SEQRES records: (download)

>d6ap4p2 d.131.1.0 (P:121-260) automated matches {Acinetobacter baumannii [TaxId: 470]}
llttensqgtqvqvtqrelkrlfektafamavqdvrfyltgtlleidenqlravttdghr
lalceilasstssqlvqaivprkavgelqrllsiedeqltlligrellnvtintpsrdke
qgditvrfttklidgkfpdy

Sequence, based on observed residues (ATOM records): (download)

>d6ap4p2 d.131.1.0 (P:121-260) automated matches {Acinetobacter baumannii [TaxId: 470]}
llttensqgtqvqvtqrelkrlfektafamavqdvrfyltgtlleidenqlravttdghr
lalceilasstssqlvqaivprkavgelqrllsiedeqltlligrellnvtintpsqgdi
tvrfttklidgkfpdy

SCOPe Domain Coordinates for d6ap4p2:

Click to download the PDB-style file with coordinates for d6ap4p2.
(The format of our PDB-style files is described here.)

Timeline for d6ap4p2:

  • d6ap4p2 appears in periodic updates to SCOPe 2.06 starting on 2017-12-21

View in 3D
Domains from other chains:
(mouse over for more information)
d6ap4a1, d6ap4a2, d6ap4a3, d6ap4a4, d6ap4b1, d6ap4b2, d6ap4b3, d6ap4b4, d6ap4c1, d6ap4c2, d6ap4c3, d6ap4c4, d6ap4d1, d6ap4d2, d6ap4d3, d6ap4d4, d6ap4e1, d6ap4e2, d6ap4e3, d6ap4e4, d6ap4f1, d6ap4f2, d6ap4f3, d6ap4f4, d6ap4g1, d6ap4g2, d6ap4g3, d6ap4g4, d6ap4h1, d6ap4h2, d6ap4h3, d6ap4h4, d6ap4i1, d6ap4i2, d6ap4i3, d6ap4i4, d6ap4j1, d6ap4j2, d6ap4j3, d6ap4j4, d6ap4k1, d6ap4k2, d6ap4k3, d6ap4l1, d6ap4l2, d6ap4l3, d6ap4l4, d6ap4m1, d6ap4m2, d6ap4m3, d6ap4m4, d6ap4n1, d6ap4n2, d6ap4n3, d6ap4n4, d6ap4o1, d6ap4o2, d6ap4o3, d6ap4o4