Lineage for d6ap4b3 (6ap4 B:261-380)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2193533Fold d.131: DNA clamp [55978] (1 superfamily)
    contains two helices and two beta sheets
    duplication: fold has internal pseudo two-fold symmetry
  4. 2193534Superfamily d.131.1: DNA clamp [55979] (3 families) (S)
  5. 2193902Family d.131.1.0: automated matches [227185] (1 protein)
    not a true family
  6. 2193903Protein automated matches [226907] (20 species)
    not a true protein
  7. 2299640Species Acinetobacter baumannii [TaxId:470] [342941] (1 PDB entry)
  8. 2299658Domain d6ap4b3: 6ap4 B:261-380 [342959]
    Other proteins in same PDB: d6ap4a4, d6ap4b4, d6ap4c4, d6ap4d4, d6ap4e4, d6ap4f4, d6ap4g4, d6ap4h4, d6ap4i4, d6ap4j4, d6ap4l4, d6ap4m4, d6ap4n4, d6ap4o4, d6ap4p4
    automated match to d4tr8a3
    complexed with mg

Details for d6ap4b3

PDB Entry: 6ap4 (more details), 2.95 Å

PDB Description: crystal structure of the dna polymerase iii subunit beta from acinetobacter baumannii
PDB Compounds: (B:) DNA polymerase III subunit beta

SCOPe Domain Sequences for d6ap4b3:

Sequence; same for both SEQRES and ATOM records: (download)

>d6ap4b3 d.131.1.0 (B:261-380) automated matches {Acinetobacter baumannii [TaxId: 470]}
rrviprggdkhvlighdvfkqslqrvailsneklrgvflnfnqdslqlrannpeqdeaie
dlaiqyqsaplemsfnaqylldvlgvldgddvnmsmteanqsvlvqdpahpdqtyvvmpm

SCOPe Domain Coordinates for d6ap4b3:

Click to download the PDB-style file with coordinates for d6ap4b3.
(The format of our PDB-style files is described here.)

Timeline for d6ap4b3:

  • d6ap4b3 appears in periodic updates to SCOPe 2.06 starting on 2017-12-21

View in 3D
Domains from other chains:
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d6ap4a1, d6ap4a2, d6ap4a3, d6ap4a4, d6ap4c1, d6ap4c2, d6ap4c3, d6ap4c4, d6ap4d1, d6ap4d2, d6ap4d3, d6ap4d4, d6ap4e1, d6ap4e2, d6ap4e3, d6ap4e4, d6ap4f1, d6ap4f2, d6ap4f3, d6ap4f4, d6ap4g1, d6ap4g2, d6ap4g3, d6ap4g4, d6ap4h1, d6ap4h2, d6ap4h3, d6ap4h4, d6ap4i1, d6ap4i2, d6ap4i3, d6ap4i4, d6ap4j1, d6ap4j2, d6ap4j3, d6ap4j4, d6ap4k1, d6ap4k2, d6ap4k3, d6ap4l1, d6ap4l2, d6ap4l3, d6ap4l4, d6ap4m1, d6ap4m2, d6ap4m3, d6ap4m4, d6ap4n1, d6ap4n2, d6ap4n3, d6ap4n4, d6ap4o1, d6ap4o2, d6ap4o3, d6ap4o4, d6ap4p1, d6ap4p2, d6ap4p3, d6ap4p4