Lineage for d5vkea2 (5vke A:119-219)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2021374Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2021375Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2025133Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 2026995Protein Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma [88574] (7 species)
  7. 2027314Species Mouse (Mus musculus) [TaxId:10090] [88576] (427 PDB entries)
    Uniprot P01864 # GCAB_MOUSE Ig gamma-2A chain C region secreted form (B allele) ! Uniprot P01863 #GCAA_MOUSE Ig gamma-2A chain C region, A allele; 86% sequence identity ! SQ NA # natural chimera; best hits are: Uniprot P01751 (Ig heavy chain V region B1-8/186-2) and Uniprot P01864 (Ig gamma-2A chain C region secreted form) ! Uniprot P01868 # GC1_MOUSE Ig gamma-1 chain C region secreted form ! Uniprot P01864 # GCAB_MOUSE (P01864) Ig gamma-2A chain C region ! Uniprot P01837 # KAC_MOUSE (P01837) Ig kappa chain C region ! Uniprot P01863 # GCAA_MOUSE Ig gamma-2A chain C region, A allele ! SQ NA # part of Fab 28 against HIV-1 RT ! Uniprot P01868 # ! GC1_MOUSE Ig gamma-1 chain C region secreted form
  8. 2027744Domain d5vkea2: 5vke A:119-219 [342513]
    Other proteins in same PDB: d5vkea1, d5vkeb1, d5vkeb2, d5vkec_
    automated match to d1r3jb2
    complexed with 1em, f09, k

Details for d5vkea2

PDB Entry: 5vke (more details), 2.37 Å

PDB Description: open conformation of kcsa deep-inactivated
PDB Compounds: (A:) Antibody Light Chain

SCOPe Domain Sequences for d5vkea2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vkea2 b.1.1.2 (A:119-219) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Mouse (Mus musculus) [TaxId: 10090]}
akttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsd
lytlsssvtvpssswpsetvtcnvahpasstkvdkkivprd

SCOPe Domain Coordinates for d5vkea2:

Click to download the PDB-style file with coordinates for d5vkea2.
(The format of our PDB-style files is described here.)

Timeline for d5vkea2: