SCOP 1.65: Domain d1yub__: 1yub -

Lineage for d1yub__ (1yub -)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (30 families)

5. Family c.66.1.24: rRNA adenine dimethylase-like [88784] (2 proteins)

6. Protein rRNA adenine dimethylase [53363] (2 species)
   contains additional all-alpha C-terminal domain (res.181-248)

7. Species Streptococcus pneumoniae, Ermam [TaxId:1313] [53364] (1 PDB entry)

8. Domain d1yub__: 1yub - [34219]
   mutant

Details for d1yub__

PDB Entry: 1yub

PDB Description: solution structure of an rrna methyltransferase (ermam) that confers macrolide-lincosamide-streptogramin antibiotic resistance, nmr, minimized average structure

SCOP Domain Sequences for d1yub__:

Sequence; same for both SEQRES and ATOM records:

>d1yub__ c.66.1.24 (-) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam}
mnknikysqnfltsekvlnqiikqlnlketdtvyeigtgkghlttklakiskqvtsield
shlfnlsseklklntrvtlihqdilqfqfpnkqrykivgnipyhlstqiikkvvfesras
diyliveegfykrtldihrtlglllhtqvsiqqllklpaecfhpkpkvnsvlikltrhtt
dvpdkywklytyfvskwvnreyrqlftknqfhqamkhakvnnlstityeqvlsifnsyll
fngrk

Timeline for d1yub__:

• d1yub__ first appeared (with stable ids) in SCOP 1.55
  
• d1yub__ appears in SCOP 1.63
  
• d1yub__ appears in SCOP 1.67
  
• d1yub__ appears in the current release, SCOPe 2.08, called d1yuba_