Lineage for d5xlzf2 (5xlz F:77-378)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2194861Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2194862Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2195211Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 protein domains)
    Pfam PF03133; PubMed 22020298
  6. 2195212Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (2 species)
  7. 2195213Species Chicken (Gallus gallus) [TaxId:9031] [311385] (38 PDB entries)
  8. 2298702Domain d5xlzf2: 5xlz F:77-378 [342003]
    Other proteins in same PDB: d5xlza1, d5xlza2, d5xlzb1, d5xlzb2, d5xlzc1, d5xlzc2, d5xlzd1, d5xlzd2, d5xlze_, d5xlzf1, d5xlzf3
    automated match to d3tiia2
    complexed with 89u, acp, ca, gdp, gtp, mes, mg

Details for d5xlzf2

PDB Entry: 5xlz (more details), 2.3 Å

PDB Description: the crystal structure of tubulin complexed with a benzylidene derivative of 9(10h)-anthracenone
PDB Compounds: (F:) tubulin tyrosine ligase

SCOPe Domain Sequences for d5xlzf2:

Sequence, based on SEQRES records: (download)

>d5xlzf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records): (download)

>d5xlzf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptderevflaaynrrregregnvwialisseasel
ldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniylyregvlrtssepyn
sanfqdktchltnhciqknygryeegnemffeefnqylmdalnttlensillqikhiirs
clmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqklyaelcqgivdv
aissvfplatsifikl

SCOPe Domain Coordinates for d5xlzf2:

Click to download the PDB-style file with coordinates for d5xlzf2.
(The format of our PDB-style files is described here.)

Timeline for d5xlzf2:

  • d5xlzf2 appears in periodic updates to SCOPe 2.06 starting on 2017-11-24