Lineage for d5xlzf1 (5xlz F:1-76)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2106806Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
    3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
    possible rudiment form of Rossmann-fold domain
  4. 2106807Superfamily c.30.1: PreATP-grasp domain [52440] (10 families) (S)
    precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
  5. 2107090Family c.30.1.9: Tubulin tyrosine ligase (TTL) N-terminal domain-like [310625] (1 protein)
  6. 2107091Protein Tubulin tyrosine ligase (TTL) N-terminal domain [310727] (2 species)
  7. 2107092Species Chicken (Gallus gallus) [TaxId:9031] [311384] (48 PDB entries)
  8. 2298701Domain d5xlzf1: 5xlz F:1-76 [342002]
    Other proteins in same PDB: d5xlza1, d5xlza2, d5xlzb1, d5xlzb2, d5xlzc1, d5xlzc2, d5xlzd1, d5xlzd2, d5xlze_, d5xlzf2, d5xlzf3
    automated match to d3tiia1
    complexed with 89u, acp, ca, gdp, gtp, mes, mg

Details for d5xlzf1

PDB Entry: 5xlz (more details), 2.3 Å

PDB Description: the crystal structure of tubulin complexed with a benzylidene derivative of 9(10h)-anthracenone
PDB Compounds: (F:) tubulin tyrosine ligase

SCOPe Domain Sequences for d5xlzf1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5xlzf1 c.30.1.9 (F:1-76) Tubulin tyrosine ligase (TTL) N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
mytfvvrdenssvyaevsrlllatgqwkrlrkdnprfnlmlgernrlpfgrlghepglvq
lvnyyrgadklcrkas

SCOPe Domain Coordinates for d5xlzf1:

Click to download the PDB-style file with coordinates for d5xlzf1.
(The format of our PDB-style files is described here.)

Timeline for d5xlzf1:

  • d5xlzf1 appears in periodic updates to SCOPe 2.06 starting on 2017-11-24