Lineage for d5x13a1 (5x13 A:1-182)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1983660Family a.4.5.0: automated matches [191329] (1 protein)
    not a true family
  6. 1983661Protein automated matches [190154] (68 species)
    not a true protein
  7. 2298637Species Bacillus subtilis [TaxId:655816] [341938] (4 PDB entries)
  8. 2298647Domain d5x13a1: 5x13 A:1-182 [341948]
    Other proteins in same PDB: d5x13a2
    automated match to d1yg2a_
    complexed with gol, hc4

Details for d5x13a1

PDB Entry: 5x13 (more details), 1.7 Å

PDB Description: crystal structure of bacillus subtilis padr in complex with p-coumaric acid
PDB Compounds: (A:) Transcriptional regulator

SCOPe Domain Sequences for d5x13a1:

Sequence, based on SEQRES records: (download)

>d5x13a1 a.4.5.0 (A:1-182) automated matches {Bacillus subtilis [TaxId: 655816]}
mrvlkyailgllrkgelsgyditsyfkeelgqfwsakhsqiypelkkltdegfitfrtti
qgtklekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfisslsrqeasdlftdq
llkrkaklsdlqgsyeklmasaepmsfsspdfghylvltkalereknyvswlesilamid
ed

Sequence, based on observed residues (ATOM records): (download)

>d5x13a1 a.4.5.0 (A:1-182) automated matches {Bacillus subtilis [TaxId: 655816]}
mrvlkyailgllrkgelsgyditsyfkeelgqfwsakhsqiypelkkltdegfitfrkkm
ytltdsgkqelhdwlirhqpipetvkdefmlkayfisslsrqeasdlftdqllkrkakls
dlqgsyeklmasaepmsfsspdfghylvltkalereknyvswlesilamided

SCOPe Domain Coordinates for d5x13a1:

Click to download the PDB-style file with coordinates for d5x13a1.
(The format of our PDB-style files is described here.)

Timeline for d5x13a1:

  • d5x13a1 appears in periodic updates to SCOPe 2.06 starting on 2017-11-24

View in 3D
Domains from same chain:
(mouse over for more information)
d5x13a2