Lineage for d5ongd_ (5ong D:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2310256Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 2310257Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 2310258Family a.22.1.1: Nucleosome core histones [47114] (6 protein domains)
    form octamers composed of two copies of each of the four histones
  6. 2310354Protein Histone H2B [47119] (6 species)
  7. 2310355Species African clawed frog (Xenopus laevis) [TaxId:8355] [47121] (39 PDB entries)
  8. 2310423Domain d5ongd_: 5ong D: [341833]
    Other proteins in same PDB: d5ongb_, d5ongc_, d5ongf_, d5ongg_
    automated match to d1s32d_
    complexed with cl, mn

Details for d5ongd_

PDB Entry: 5ong (more details), 2.8 Å

PDB Description: x-ray crystal structure of a nucleosome core particle with its dna site-specifically crosslinked to the histone octamer
PDB Compounds: (D:) Histone H2B 1.1

SCOPe Domain Sequences for d5ongd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ongd_ a.22.1.1 (D:) Histone H2B {African clawed frog (Xenopus laevis) [TaxId: 8355]}

SCOPe Domain Coordinates for d5ongd_:

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Timeline for d5ongd_: