Lineage for d6b9jl1 (6b9j L:2-108)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2017117Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2019634Protein automated matches [190119] (22 species)
    not a true protein
  7. 2019694Species Human (Homo sapiens) [TaxId:9606] [188740] (180 PDB entries)
  8. 2298486Domain d6b9jl1: 6b9j L:2-108 [341787]
    Other proteins in same PDB: d6b9jb2, d6b9jl2, d6b9jx1, d6b9jx2, d6b9jy1, d6b9jy2
    automated match to d1dn0a1
    complexed with gol, na

Details for d6b9jl1

PDB Entry: 6b9j (more details), 2.9 Å

PDB Description: structure of vaccinia virus d8 protein bound to human fab vv138
PDB Compounds: (L:) Fab vv138 Light chain

SCOPe Domain Sequences for d6b9jl1:

Sequence, based on SEQRES records: (download)

>d6b9jl1 b.1.1.1 (L:2-108) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ivltqspgtlslspgeratlscrasqsvtstylawhqqkpgqaprlliysassratgipd
rfsgsgsgtdftltisrlepedfavyycqqygssppytfgqgtkvdi

Sequence, based on observed residues (ATOM records): (download)

>d6b9jl1 b.1.1.1 (L:2-108) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ivltqspgtlslspgeratlscrasqsvtstylawhqqkpgqaprlliyssratgipdrf
sgsgsgtdftltisrlepedfavyycqqygpytfgqgtkvdi

SCOPe Domain Coordinates for d6b9jl1:

Click to download the PDB-style file with coordinates for d6b9jl1.
(The format of our PDB-style files is described here.)

Timeline for d6b9jl1:

  • d6b9jl1 appears in periodic updates to SCOPe 2.06 starting on 2017-11-24