SCOPe 2.08: Domain d6b8sa1: 6b8s A:3-348

Lineage for d6b8sa1 (6b8s A:3-348)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.0: automated matches [191310] (1 protein)
   not a true family

6. Protein automated matches [190048] (31 species)
   not a true protein

7. Species Helicobacter pylori [TaxId:563041] [341774] (1 PDB entry)

8. Domain d6b8sa1: 6b8s A:3-348 [341779]
   Other proteins in same PDB: d6b8sa2, d6b8sb2
   automated match to d4rlia_
   complexed with fmn, pge

Details for d6b8sa1

PDB Entry: 6b8s, 2.25 Å

PDB Description: crystal structure of dihydroorotate dehydrogenase from helicobacter pylori with bound fmn

PDB Compounds: (A:) Dihydroorotate dehydrogenase (quinone)

SCOPe Domain Sequences for d6b8sa1:

Sequence, based on SEQRES records:

>d6b8sa1 c.1.4.0 (A:3-348) automated matches {Helicobacter pylori [TaxId: 563041]}
yplvkkylfsldaedahekvckilrtlskssflcslihsqwgyknpkleneilglnfpnp
lglaagfdknasmlraliafgfgyleagtltneaqvgnerprlfrhieeeslqnamgfnn
ygavlgarsfnrfapyktpiginlgknkhieqahaledykavlnqclnigdyytfnlssp
ntpnlrdlqnkafvnelfcmakemthkplflkiapdleiddmleivnsaieagahgiiat
nttidkslvfapkemgglsgkcltkksrevfkelakaffnksvlvsvggisdakeayeri
kmgasllqiysafiyngpnlcqnilkdlvkllqkdgflsvkeaiga

Sequence, based on observed residues (ATOM records):

>d6b8sa1 c.1.4.0 (A:3-348) automated matches {Helicobacter pylori [TaxId: 563041]}
yplvkkylfsldaedahekvckilrtlskssflcslihsqwgyknpkleneilglnfpnp
lglaagfdknasmlraliafgfgyleagtltneaqvgnerprlfrhieeeslqnamgfnn
ygavlgarsfnrfapyktpiginlgknkhieqahaledykavlnqclnigdyytfnlnka
fvnelfcmakemthkplflkiapdleiddmleivnsaieagahgiiatnttidkslvfap
kemgglsgkcltkksrevfkelakaffnksvlvsvggisdakeayerikmgasllqiysa
fiyngpnlcqnilkdlvkllqkdgflsvkeaiga

Timeline for d6b8sa1:

• d6b8sa1 first appeared in SCOPe 2.06
  
• d6b8sa1 appears in SCOPe 2.07