Lineage for d5wvob_ (5wvo B:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158454Protein Ubiquitin [54238] (8 species)
  7. 2158532Species Human (Homo sapiens) [TaxId:9606] [54239] (208 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2298446Domain d5wvob_: 5wvo B: [341747]
    automated match to d3rula_
    protein/DNA complex; complexed with zn

Details for d5wvob_

PDB Entry: 5wvo (more details), 2 Å

PDB Description: crystal structure of dnmt1 rfts domain in complex with k18/k23 mono- ubiquitylated histone h3
PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d5wvob_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5wvob_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgc

SCOPe Domain Coordinates for d5wvob_:

Click to download the PDB-style file with coordinates for d5wvob_.
(The format of our PDB-style files is described here.)

Timeline for d5wvob_:

  • d5wvob_ appears in periodic updates to SCOPe 2.06 starting on 2017-11-17