Lineage for d5yl4d1 (5yl4 D:1-243)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2107739Fold c.32: Tubulin nucleotide-binding domain-like [52489] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 2107740Superfamily c.32.1: Tubulin nucleotide-binding domain-like [52490] (2 families) (S)
    automatically mapped to Pfam PF00091
  5. 2107741Family c.32.1.1: Tubulin, GTPase domain [52491] (4 protein domains)
  6. 2107851Protein automated matches [226837] (7 species)
    not a true protein
  7. 2107966Species Sus barbatus [TaxId:41807] [278811] (7 PDB entries)
  8. 2298404Domain d5yl4d1: 5yl4 D:1-243 [341705]
    Other proteins in same PDB: d5yl4a2, d5yl4b2, d5yl4c2, d5yl4d2, d5yl4e_, d5yl4f1, d5yl4f2
    automated match to d4drxb1
    complexed with 8wr, acp, ca, gdp, gtp, mes, mg

Details for d5yl4d1

PDB Entry: 5yl4 (more details), 2.64 Å

PDB Description: crystal structure of t2r-ttl-8wr complex
PDB Compounds: (D:) Tubulin beta chain

SCOPe Domain Sequences for d5yl4d1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5yl4d1 c.32.1.1 (D:1-243) automated matches {Sus barbatus [TaxId: 41807]}
mreivhiqagqcgnqigakfwevisdehgidptgsyhgdsdlqlerinvyyneatgnkyv
prailvdlepgtmdsvrsgpfgqifrpdnfvfgqsgagnnwakghytegaelvdsvldvv
rkesescdclqgfqlthslgggtgsgmgtlliskireeypdrimntfsvmpspkvsdtvv
epynatlsvhqlventdetycidnealydicfrtlklttptygdlnhlvsatmsgvttcl
rfp

SCOPe Domain Coordinates for d5yl4d1:

Click to download the PDB-style file with coordinates for d5yl4d1.
(The format of our PDB-style files is described here.)

Timeline for d5yl4d1:

  • d5yl4d1 appears in periodic updates to SCOPe 2.06 starting on 2017-11-17