Lineage for d5o44f_ (5o44 F:)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2177211Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2177212Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2177213Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2177487Protein Ubiquitin [54238] (8 species)
  7. 2177587Species Human (Homo sapiens) [TaxId:9606] [54239] (209 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2177951Domain d5o44f_: 5o44 F: [341263]
    Other proteins in same PDB: d5o44a_, d5o44b_, d5o44c_, d5o44e_
    automated match to d1zgub1
    complexed with mg, so4

Details for d5o44f_

PDB Entry: 5o44 (more details), 3.14 Å

PDB Description: crystal structure of unbranched mixed tri-ubiquitin chain containing k48 and k63 linkages.
PDB Compounds: (F:) Polyubiquitin-B

SCOPe Domain Sequences for d5o44f_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5o44f_ d.15.1.1 (F:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagrqledgrtlsdyn
iqkestlhlvlrlrgg

SCOPe Domain Coordinates for d5o44f_:

Click to download the PDB-style file with coordinates for d5o44f_.
(The format of our PDB-style files is described here.)

Timeline for d5o44f_: