SCOPe 2.08: Domain d5okab_: 5oka B:

Lineage for d5okab_ (5oka B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (132 species)
   not a true protein

7. Species Geobacillus stearothermophilus [TaxId:1422] [319127] (16 PDB entries)

8. Domain d5okab_: 5oka B: [340601]
   automated match to d1pbga_
   complexed with gol, imd; mutant

Details for d5okab_

PDB Entry: 5oka, 1.25 Å

PDB Description: non-conservatively refined structure of gan1d-e170q, a catalytic mutant of a 6-phospho-beta-galactosidase from geobacillus stearothermophilus

PDB Compounds: (B:) Putative 6-phospho-beta-galactobiosidase

SCOPe Domain Sequences for d5okab_:

Sequence, based on SEQRES records:

>d5okab_ c.1.8.0 (B:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
rhlkpfppeflwgaasaayqvegawnedgkglsvwdvfakqpgrtfkgtngdvavdhyhr
yqedvalmaemglkayrfsvswsrvfpdgngavnekgldfydrlieelrnhgiepivtly
hwdvpqalmdaygawesrriiddfdryavtlfqrfgdrvkywvtlnqqnifisfgyrlgl
hppgvkdmkrmyeanhianlanakviqsfrhyvpdgkigpsfayspmypydsrpenvlaf
enaeefqnhwwmdvyawgmypqaawnylesqgleptvapgdwellqaakpdfmgvnyyqt
ttvehnppdgvgegvmnttgkkgtstssgipglfktvrnphvdttnwdwaidpvglrigl
rrianryqlpilitenglgefdtlepgdivnddyridylrrhvqeiqraitdgvdvlgyc
awsftdllswlngyqkrygfvyvnrddesekdlrrikkksfywyqrvietngael

Sequence, based on observed residues (ATOM records):

>d5okab_ c.1.8.0 (B:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
rhlkpfppeflwgaasaayqvegawnedgkglsvwdvfakqpgrtfkgtngdvavdhyhr
yqedvalmaemglkayrfsvswsrvfpdgngavnekgldfydrlieelrnhgiepivtly
hwdvpqalmdaygawesrriiddfdryavtlfqrfgdrvkywvtlnqqnifisfgyrlgl
hppgvkdmkrmyeanhianlanakviqsfrhyvpdgkigpsfayspmypydsrpenvlaf
enaeefqnhwwmdvyawgmypqaawnylesqgleptvapgdwellqaakpdfmgvnyyqt
ttvehnppdgvgtssgipglfktvrnphvdttnwdwaidpvglriglrrianryqlpili
tenglgefdtlepgdivnddyridylrrhvqeiqraitdgvdvlgycawsftdllswlng
yqkrygfvyvnrddesekdlrrikkksfywyqrvietngael

Timeline for d5okab_:

• d5okab_ first appeared in SCOPe 2.06
  
• d5okab_ appears in SCOPe 2.07