Lineage for d5mm3b_ (5mm3 B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2145531Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2145532Protein automated matches [190039] (138 species)
    not a true protein
  7. 2297171Species Methanosarcina mazei [TaxId:2209] [340472] (1 PDB entry)
  8. 2297172Domain d5mm3b_: 5mm3 B: [340473]
    automated match to d4hw8a_
    complexed with mal

Details for d5mm3b_

PDB Entry: 5mm3 (more details), 2.1 Å

PDB Description: unstructured mamc magnetite-binding protein located between two helices.
PDB Compounds: (B:) Sugar ABC transporter substrate-binding protein,Magnetosome protein MamC,Sugar ABC transporter substrate-binding protein

SCOPe Domain Sequences for d5mm3b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5mm3b_ c.94.1.0 (B:) automated matches {Methanosarcina mazei [TaxId: 2209]}
kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdii
fwahdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkd
llpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyengkydikd
vgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskv
nygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplg
avalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaas

SCOPe Domain Coordinates for d5mm3b_:

Click to download the PDB-style file with coordinates for d5mm3b_.
(The format of our PDB-style files is described here.)

Timeline for d5mm3b_:

  • d5mm3b_ appears in periodic updates to SCOPe 2.06 starting on 2017-10-29