Lineage for d5ox5a_ (5ox5 A:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2070014Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2070786Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2071201Family b.82.2.15: proly-4-hydroxylase (P4H, PHD) like [254173] (3 protein domains)
    Pfam PF13640; PubMed 16782814
  6. 2071209Protein automated matches [254532] (2 species)
    not a true protein
  7. 2071217Species Human (Homo sapiens) [TaxId:9606] [255179] (25 PDB entries)
  8. 2296989Domain d5ox5a_: 5ox5 A: [340290]
    automated match to d3ouja_
    protein/DNA complex; complexed with b2e, bct, mn

Details for d5ox5a_

PDB Entry: 5ox5 (more details), 2.25 Å

PDB Description: hif prolyl hydroxylase 2 (phd2/ egln1) in complex with cct6, a gsk1278863-related compound
PDB Compounds: (A:) Egl nine homolog 1

SCOPe Domain Sequences for d5ox5a_:

Sequence, based on SEQRES records: (download)

>d5ox5a_ b.82.2.15 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lpalklaleyivpcmnkhgicvvddflgketgqqigdevralhdtgkftdgqlvsqksds
skdirgdkitwiegkepgcetigllmssmddlirhcngklgsykingrtkamvacypgng
tgyvrhvdnpngdgrcvtciyylnkdwdakvsggilrifpegkaqfadiepkfdrllffw
sdrrnphevqpayatryaitvwyfdaderarakvkyltgekgvrvel

Sequence, based on observed residues (ATOM records): (download)

>d5ox5a_ b.82.2.15 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lpalklaleyivpcmnkhgicvvddflgketgqqigdevralhdtgkftdgqlvsqksds
skdirgdkitwiegkepgcetigllmssmddlirhcngklgsykingrtkamvacypgng
tgyvrhvdnpngdgrcvtciyylnkdwdakvsggilrifpegkaqfadiepkfdrllffw
sdrrnphevqpayatryaitvwyfdaderarakvkyvrvel

SCOPe Domain Coordinates for d5ox5a_:

Click to download the PDB-style file with coordinates for d5ox5a_.
(The format of our PDB-style files is described here.)

Timeline for d5ox5a_:

  • d5ox5a_ appears in periodic updates to SCOPe 2.06 starting on 2017-10-29