Lineage for d5ocrb_ (5ocr B:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2042196Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2042197Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2042910Family b.29.1.2: Glycosyl hydrolases family 16 [49925] (7 protein domains)
    Pfam PF00722
    beta-Glucanase-like
  6. 2042978Protein kappa-Carrageenase, catalytic [49930] (2 species)
    1,3-alpha-1,4-beta-D-galactose-4-sulfate-3,6-anhydro-D-galactose 4 galactohydrolase
  7. 2296961Species Zobellia galactanivorans [TaxId:63186] [340263] (1 PDB entry)
  8. 2296964Domain d5ocrb_: 5ocr B: [340264]
    automated match to d1dypa_
    complexed with gol, mg

Details for d5ocrb_

PDB Entry: 5ocr (more details), 1.66 Å

PDB Description: crystal structure of the kappa-carrageenase zobellia_236 from zobellia galactanivorans
PDB Compounds: (B:) kappa-carrageenase

SCOPe Domain Sequences for d5ocrb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ocrb_ b.29.1.2 (B:) kappa-Carrageenase, catalytic {Zobellia galactanivorans [TaxId: 63186]}
qqptktsnpndqwtikwsasdefnkndpdwakwiktgnlpntsawkwnnqknvkisngia
eltmrhnanntpdggtyftsgifksyqkftygyfeakiqgadigegvcpsfwlysdfdys
vangetvyseidvvelqqfdwyeghqddiydmdlnlhavvkengqgvwkrpkmypqeqln
kwrapwdpskdfhiygcevnqneiiwyvdgvevarkpnkywhrpmnvtlslglrkpfvkf
fdnknnainpetdakareklsdiptsmyvdyvrvweks

SCOPe Domain Coordinates for d5ocrb_:

Click to download the PDB-style file with coordinates for d5ocrb_.
(The format of our PDB-style files is described here.)

Timeline for d5ocrb_:

  • d5ocrb_ appears in periodic updates to SCOPe 2.06 starting on 2017-10-29