SCOPe 2.06: Domain d5kd4a2: 5kd4 A:182-274

Lineage for d5kd4a2 (5kd4 A:182-274)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein Class I MHC, alpha-3 domain [88604] (4 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [88606] (109 PDB entries)
   Uniprot P01901 22-299

8. Domain d5kd4a2: 5kd4 A:182-274 [340009]
   Other proteins in same PDB: d5kd4a1, d5kd4b_, d5kd4c1, d5kd4d_
   automated match to d1qo3a1

Details for d5kd4a2

PDB Entry: 5kd4, 3.05 Å

PDB Description: crystal structure of murine mhc-i h-2dd in complex with murine beta2- microglobulin and a variant of peptide (pvi10) of hiv gp120 mn isolate (igpgrafyvi)

PDB Compounds: (A:) H-2 class I histocompatibility antigen, D-D alpha chain

SCOPe Domain Sequences for d5kd4a2:

Sequence; same for both SEQRES and ATOM records:

>d5kd4a2 b.1.1.2 (A:182-274) Class I MHC, alpha-3 domain {Mouse (Mus musculus) [TaxId: 10090]}
tdppkahvthhrrpegdvtlrcwalgfypaditltwqlngeeltqemelvetrpagdgtf
qkwasvvvplgkeqkytchveheglpepltlrw

Timeline for d5kd4a2:

• d5kd4a2 is new in SCOPe 2.06-stable
  
• d5kd4a2 appears in SCOPe 2.07
  
• d5kd4a2 appears in the current release, SCOPe 2.08