Lineage for d5xs4c_ (5xs4 C:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410108Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2410109Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2410393Protein automated matches [190854] (17 species)
    not a true protein
  7. 2410409Species Coxsackievirus a6 [TaxId:86107] [339711] (2 PDB entries)
  8. 2410411Domain d5xs4c_: 5xs4 C: [339712]
    Other proteins in same PDB: d5xs4a1, d5xs4b_
    automated match to d5c8cc_

Details for d5xs4c_

PDB Entry: 5xs4 (more details), 3.1 Å

PDB Description: structure of coxsackievirus a6 (cva6) virus a-particle
PDB Compounds: (C:) Genome polyprotein

SCOPe Domain Sequences for d5xs4c_:

Sequence, based on SEQRES records: (download)

>d5xs4c_ b.121.4.1 (C:) automated matches {Coxsackievirus a6 [TaxId: 86107]}

Sequence, based on observed residues (ATOM records): (download)

>d5xs4c_ b.121.4.1 (C:) automated matches {Coxsackievirus a6 [TaxId: 86107]}

SCOPe Domain Coordinates for d5xs4c_:

Click to download the PDB-style file with coordinates for d5xs4c_.
(The format of our PDB-style files is described here.)

Timeline for d5xs4c_: