Lineage for d5nvyk1 (5nvy K:17-112)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2513276Fold d.42: POZ domain [54694] (1 superfamily)
    core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143
  4. 2513277Superfamily d.42.1: POZ domain [54695] (3 families) (S)
  5. 2513278Family d.42.1.1: BTB/POZ domain [54696] (6 proteins)
  6. 2513355Protein Elongin C [54699] (3 species)
  7. 2513358Species Human (Homo sapiens) [TaxId:9606] [54700] (52 PDB entries)
  8. 2513492Domain d5nvyk1: 5nvy K:17-112 [339187]
    Other proteins in same PDB: d5nvya_, d5nvyb2, d5nvyc_, d5nvyd_, d5nvye2, d5nvyf_, d5nvyg_, d5nvyh2, d5nvyi_, d5nvyj_, d5nvyk2, d5nvyl_
    automated match to d1lm8c_
    complexed with 9b5

Details for d5nvyk1

PDB Entry: 5nvy (more details), 2.9 Å

PDB Description: pvhl:elob:eloc in complex with (2s,4r)-1-((s)-2-acetamidopropanoyl)-4- hydroxy-n-(4-(4-methylthiazol-5-yl)benzyl) pyrrolidine-2-carboxamide (ligand 11)
PDB Compounds: (K:) Elongin-C

SCOPe Domain Sequences for d5nvyk1:

Sequence, based on SEQRES records: (download)

>d5nvyk1 d.42.1.1 (K:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
myvklissdghefivkrehaltsgtikamlsgpgqfaenetnevnfreipshvlskvcmy
ftykvrytnssteipefpiapeialellmaanfldc

Sequence, based on observed residues (ATOM records): (download)

>d5nvyk1 d.42.1.1 (K:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
myvklissdghefivkrehaltsgtikamlstnevnfreipshvlskvcmyftykvrytn
ssteipefpiapeialellmaanfldc

SCOPe Domain Coordinates for d5nvyk1:

Click to download the PDB-style file with coordinates for d5nvyk1.
(The format of our PDB-style files is described here.)

Timeline for d5nvyk1: