Lineage for d5y98a1 (5y98 A:1-193)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2464564Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2465875Superfamily c.56.3: Peptidyl-tRNA hydrolase-like [53178] (2 families) (S)
  5. 2465889Family c.56.3.0: automated matches [193325] (1 protein)
    not a true family
  6. 2465890Protein automated matches [193326] (11 species)
    not a true protein
  7. 2465891Species Acinetobacter baumannii [TaxId:575584] [196867] (24 PDB entries)
  8. 2465896Domain d5y98a1: 5y98 A:1-193 [339034]
    Other proteins in same PDB: d5y98a2
    automated match to d4qaja_
    complexed with gol

Details for d5y98a1

PDB Entry: 5y98 (more details), 1.36 Å

PDB Description: crystal structure of native unbound peptidyl trna hydrolase from acinetobacter baumannii at 1.36 a resolution
PDB Compounds: (A:) Peptidyl-tRNA hydrolase

SCOPe Domain Sequences for d5y98a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5y98a1 c.56.3.0 (A:1-193) automated matches {Acinetobacter baumannii [TaxId: 575584]}
msnislivglgnpgseyaqtrhnagfwfveqladkygitlkndpkfhgisgrgnieghdv
rlllpmtymnrsgqsvvpfskfyqiapeailiahdeldmnpgvirlktggghgghnglrd
ivphigpnfhrlrigighpgskervsghvlgkapsneqslmdgaidhalskvkllvqgqv
pqamnqinaykpa

SCOPe Domain Coordinates for d5y98a1:

Click to download the PDB-style file with coordinates for d5y98a1.
(The format of our PDB-style files is described here.)

Timeline for d5y98a1:

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Domains from same chain:
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d5y98a2