Lineage for d5vxjc_ (5vxj C:)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2738288Fold a.250: IpaD-like [140692] (1 superfamily)
    6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest
  4. 2738289Superfamily a.250.1: IpaD-like [140693] (2 families) (S)
  5. 2738290Family a.250.1.1: IpaD-like [140694] (3 proteins)
    Pfam PF06511
  6. 2738307Protein automated matches [191266] (1 species)
    not a true protein
  7. 2738308Species Shigella flexneri [TaxId:623] [189835] (7 PDB entries)
  8. 2738313Domain d5vxjc_: 5vxj C: [338774]
    Other proteins in same PDB: d5vxjb_, d5vxjd_, d5vxjf_, d5vxjh_, d5vxjj_
    automated match to d2j0oa1

Details for d5vxjc_

PDB Entry: 5vxj (more details), 2.5 Å

PDB Description: 2.50 a resolution structure of ipad from shigella flexneri in complex with single-domain antibody jmk-e3
PDB Compounds: (C:) invasin ipad

SCOPe Domain Sequences for d5vxjc_:

Sequence, based on SEQRES records: (download)

>d5vxjc_ a.250.1.1 (C:) automated matches {Shigella flexneri [TaxId: 623]}
sltmlndtlhnirttnqalkkelsqktltktsleeialhssqismdvnksaqlldilsrn
eypinkdarellhsapkeaeldgdqmishrelwakiansindineqylkvyehavssytq
myqdfsavlsslagwispggndgnsvklqvnslkkaleelkekykdkplypanntvsqeq
ankwltelggtigkvsqknggyvvsinmtpidnmlksldnlggngevvldnakyqawnag
fsaedetmknnlqtlvqkysnansifdnlvkvlsstis

Sequence, based on observed residues (ATOM records): (download)

>d5vxjc_ a.250.1.1 (C:) automated matches {Shigella flexneri [TaxId: 623]}
sltmlndtlhnirttnqalkkelsqktltktsleeialhssqismdvnksaqlldilsrn
eypinkdarellhsapkeaeldgdqmishrelwakiansindineqylkvyehavssytq
myqdfsavlsslagwispgsvklqvnslkkaleelkekykdkplypanntvsqeqankwl
telggtigkvsqknggyvvsinmtpidnmlksldnlggngevvldnakyqawnagfsaed
etmknnlqtlvqkysnansifdnlvkvlsstis

SCOPe Domain Coordinates for d5vxjc_:

Click to download the PDB-style file with coordinates for d5vxjc_.
(The format of our PDB-style files is described here.)

Timeline for d5vxjc_: