Lineage for d5m2ie_ (5m2i E:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2777171Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2777172Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2777173Family b.22.1.1: TNF-like [49843] (15 proteins)
  6. 2777391Protein Tumor necrosis factor (TNF) [49848] (3 species)
  7. 2777392Species Human (Homo sapiens) [TaxId:9606] [49849] (33 PDB entries)
  8. 2777425Domain d5m2ie_: 5m2i E: [338542]
    Other proteins in same PDB: d5m2ig_, d5m2ih_, d5m2ii_, d5m2ij_, d5m2ik_, d5m2il_
    automated match to d1a8ma_

Details for d5m2ie_

PDB Entry: 5m2i (more details), 2.15 Å

PDB Description: structure of human tumor necrosis factor (tnf) in complex with the llama vhh1
PDB Compounds: (E:) Tumor necrosis factor

SCOPe Domain Sequences for d5m2ie_:

Sequence, based on SEQRES records: (download)

>d5m2ie_ b.22.1.1 (E:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
dkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqgc
psthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqlekg
drlsaeinrpdyldfaesgqvyfgiial

Sequence, based on observed residues (ATOM records): (download)

>d5m2ie_ b.22.1.1 (E:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
dkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqgc
psthvllthtisriavsyqtkvnllsaikspcqretpaeakpwyepiylggvfqlekgdr
lsaeinrpdyldfaesgqvyfgiial

SCOPe Domain Coordinates for d5m2ie_:

Click to download the PDB-style file with coordinates for d5m2ie_.
(The format of our PDB-style files is described here.)

Timeline for d5m2ie_: