Lineage for d5m2ia_ (5m2i A:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2372079Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2372080Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2372081Family b.22.1.1: TNF-like [49843] (15 proteins)
  6. 2372278Protein Tumor necrosis factor (TNF) [49848] (2 species)
  7. 2372279Species Human (Homo sapiens) [TaxId:9606] [49849] (21 PDB entries)
  8. 2372305Domain d5m2ia_: 5m2i A: [338539]
    Other proteins in same PDB: d5m2ig_, d5m2ih_, d5m2ii_, d5m2ij_, d5m2ik_, d5m2il_
    automated match to d1a8ma_

Details for d5m2ia_

PDB Entry: 5m2i (more details), 2.15 Å

PDB Description: structure of human tumor necrosis factor (tnf) in complex with the llama vhh1
PDB Compounds: (A:) Tumor necrosis factor

SCOPe Domain Sequences for d5m2ia_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5m2ia_ b.22.1.1 (A:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
dkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqgc
psthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqlekg
drlsaeinrpdyldfaesgqvyfgiial

SCOPe Domain Coordinates for d5m2ia_:

Click to download the PDB-style file with coordinates for d5m2ia_.
(The format of our PDB-style files is described here.)

Timeline for d5m2ia_: