Lineage for d5m2mc_ (5m2m C:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2372079Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2372080Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2372081Family b.22.1.1: TNF-like [49843] (15 proteins)
  6. 2372278Protein Tumor necrosis factor (TNF) [49848] (2 species)
  7. 2372279Species Human (Homo sapiens) [TaxId:9606] [49849] (21 PDB entries)
  8. 2372316Domain d5m2mc_: 5m2m C: [338525]
    Other proteins in same PDB: d5m2md1, d5m2md2, d5m2me1, d5m2me2, d5m2mf1, d5m2mf2, d5m2mh1, d5m2mh2, d5m2mj1, d5m2mj2, d5m2mn1, d5m2mn2
    automated match to d1a8ma_

Details for d5m2mc_

PDB Entry: 5m2m (more details), 2.3 Å

PDB Description: complex between human tnf alpha and llama vhh3
PDB Compounds: (C:) Tumor necrosis factor

SCOPe Domain Sequences for d5m2mc_:

Sequence, based on SEQRES records: (download)

>d5m2mc_ b.22.1.1 (C:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
tpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkg
qgcpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfql
ekgdrlsaeinrpdyldfaesgqvyfgiial

Sequence, based on observed residues (ATOM records): (download)

>d5m2mc_ b.22.1.1 (C:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
tpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkg
qgcpthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqle
kgdrlsaeinrpdyldfaesgqvyfgiial

SCOPe Domain Coordinates for d5m2mc_:

Click to download the PDB-style file with coordinates for d5m2mc_.
(The format of our PDB-style files is described here.)

Timeline for d5m2mc_: