Lineage for d5ndca_ (5ndc A:)

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2579534Fold f.24: Cytochrome c oxidase subunit I-like [81443] (1 superfamily)
    12 transmembrane helices in an approximate threefold rotational symmetric arrangement
  4. 2579535Superfamily f.24.1: Cytochrome c oxidase subunit I-like [81442] (1 family) (S)
  5. 2579536Family f.24.1.1: Cytochrome c oxidase subunit I-like [81441] (5 proteins)
    the largest and best conserved subunit, contains two heme groups, low spin heme a and high spin heme a3
  6. 2579554Protein Bacterial ba3 type cytochrome c oxidase subunit I [81438] (1 species)
  7. 2579555Species Thermus thermophilus [TaxId:274] [81437] (29 PDB entries)
  8. 2579571Domain d5ndca_: 5ndc A: [338224]
    Other proteins in same PDB: d5ndcb1, d5ndcb2, d5ndcc_
    automated match to d1xmea_
    complexed with cu, cua, has, hem, olc

Details for d5ndca_

PDB Entry: 5ndc (more details), 2.3 Å

PDB Description: structure of ba3-type cytochrome c oxidase from thermus thermophilus by serial femtosecond crystallography
PDB Compounds: (A:) Cytochrome c oxidase subunit 1

SCOPe Domain Sequences for d5ndca_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ndca_ f.24.1.1 (A:) Bacterial ba3 type cytochrome c oxidase subunit I {Thermus thermophilus [TaxId: 274]}
srvyeaypekkatlyflvlgflalivgslfgpfqalnygnvdaypllkrllpfvqsyyqg
ltlhgvlnaivftqlfaqaimvylparelnmrpnmglmwlswwmafiglvvaalpllane
atvlytfypplkghwafylgasvfvlstwvsiyivldlwrrwkaanpgkvtplvtymavv
fwlmwflaslglvleavlfllpwsfglvegvdplvartlfwwtghpivyfwllpayaiiy
tilpkqaggklvsdpmarlafllflllstpvgfhhqfadpgidptwkmihsvltlfvavp
slmtaftvaaslefagrlrggrglfgwiralpwdnpafvapvlgllgfipggaggivnas
ftldyvvhntawvpghfhlqvaslvtltamgslywllpnltgkpisdaqrrlglavvwlw
flgmmimavglhwagllnvprrayiaqvpdayphaavpmvfnvlagivllvalllfiygl
fsvllsrerkpelaeaplpfaevisgpedrrlvlamdrigfwfavaailvvlaygptlvq
lfghlnpvpgwrlw

SCOPe Domain Coordinates for d5ndca_:

Click to download the PDB-style file with coordinates for d5ndca_.
(The format of our PDB-style files is described here.)

Timeline for d5ndca_: