Lineage for d5o4cm_ (5o4c M:)

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2579766Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
    five transmembrane helices forming a sheet-like structure
  4. 2579767Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family) (S)
    automatically mapped to Pfam PF00124
  5. 2579768Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (5 proteins)
    L and M are probably related to each other
  6. 2579858Protein M (medium) subunit [81481] (4 species)
  7. 2579931Species Rhodopseudomonas viridis [TaxId:1079] [81478] (14 PDB entries)
  8. 2579945Domain d5o4cm_: 5o4c M: [337896]
    Other proteins in same PDB: d5o4cc_, d5o4ch1, d5o4ch2, d5o4cl_
    automated match to d6prcm_
    complexed with bcb, bpb, dga, fe2, hec, hto, lda, mq7, ns5, so4

Details for d5o4cm_

PDB Entry: 5o4c (more details), 2.8 Å

PDB Description: from macrocrystals to microcrystals: a strategy for membrane protein serial crystallography
PDB Compounds: (M:) reaction center protein m chain

SCOPe Domain Sequences for d5o4cm_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5o4cm_ f.26.1.1 (M:) M (medium) subunit {Rhodopseudomonas viridis [TaxId: 1079]}
adyqtiytqiqargphitvsgewgdndrvgkpfysywlgkigdaqigpiylgasgiaafa
fgstailiilfnmaaevhfdplqffrqffwlglyppkaqygmgipplhdggwwlmaglfm
tlslgswwirvysraralglgthiawnfaaaiffvlcigcihptlvgswsegvpfgiwph
idwltafsirygnfyycpwhgfsigfaygcgllfaahgatilavarfggdreieqitdrg
taveraalfwrwtigfnatiesvhrwgwffslmvmvsasvgilltgtfvdnwylwcvkhg
aapdypaylpatpdpaslpgapk

SCOPe Domain Coordinates for d5o4cm_:

Click to download the PDB-style file with coordinates for d5o4cm_.
(The format of our PDB-style files is described here.)

Timeline for d5o4cm_: