SCOPe 2.06: Domain d5vypq1: 5vyp Q:1-47

Lineage for d5vypq1 (5vyp Q:1-47)

1. Root: SCOPe 2.06

2. Class g: Small proteins [56992] (94 folds)

3. Fold g.3: Knottins (small inhibitors, toxins, lectins) [57015] (19 superfamilies)
   disulfide-bound fold; contains beta-hairpin with two adjacent disulfides

4. Superfamily g.3.7: Scorpion toxin-like [57095] (6 families)

5. Family g.3.7.5: Plant defensins [57170] (9 proteins)

6. Protein automated matches [191215] (9 species)
   not a true protein

7. Species Nicotiana suaveolens [TaxId:200320] [337270] (1 PDB entry)

8. Domain d5vypq1: 5vyp Q:1-47 [337450]
   Other proteins in same PDB: d5vypb2, d5vypc2, d5vypd2, d5vype2, d5vypf2, d5vypg2, d5vyph2, d5vypi2, d5vypj2, d5vypk2, d5vypo2, d5vypp2, d5vypq2, d5vypr2, d5vyps2, d5vypt2, d5vypu2, d5vypv2, d5vypw2, d5vypx2
   automated match to d1mr4a_
   complexed with gol, pio, so4

Details for d5vypq1

PDB Entry: 5vyp, 2.6 Å

PDB Description: crystal structure of the plant defensin nsd7 bound to pip2

PDB Compounds: (Q:) Defensin NsD7

SCOPe Domain Sequences for d5vypq1:

Sequence; same for both SEQRES and ATOM records:

>d5vypq1 g.3.7.5 (Q:1-47) automated matches {Nicotiana suaveolens [TaxId: 200320]}
kdckresntfpgicitkppcrkacirekftdghcskilrrclctkpc

Timeline for d5vypq1:

• d5vypq1 is new in SCOPe 2.06-stable
  
• d5vypq1 appears in SCOPe 2.07
  
• d5vypq1 appears in the current release, SCOPe 2.08