Lineage for d5xl1c_ (5xl1 C:)

  1. Root: SCOPe 2.06
  2. 2237529Class h: Coiled coil proteins [57942] (7 folds)
  3. 2238933Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
    core: trimeric coiled coil
  4. 2238934Superfamily h.3.1: Influenza hemagglutinin (stalk) [58064] (2 families) (S)
  5. 2238935Family h.3.1.1: Influenza hemagglutinin (stalk) [58065] (2 protein domains)
  6. 2239322Protein automated matches [254646] (34 species)
    not a true protein
  7. 2294004Species Influenza a virus (strain a/duck/czechoslovakia/1956 h4n6) [TaxId:385590] [337305] (9 PDB entries)
  8. 2294006Domain d5xl1c_: 5xl1 C: [337307]
    Other proteins in same PDB: d5xl1a_, d5xl1b_
    automated match to d4d00d_
    complexed with nag

Details for d5xl1c_

PDB Entry: 5xl1 (more details), 2.3 Å

PDB Description: the structure of hemagglutinin from an avian-origin h4n6 influenza virus
PDB Compounds: (C:) Hemagglutinin

SCOPe Domain Sequences for d5xl1c_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5xl1c_ h.3.1.1 (C:) automated matches {Influenza a virus (strain a/duck/czechoslovakia/1956 h4n6) [TaxId: 385590]}
glfgaiagfiengwqglidgwygfrhqnaegtgtaadlkstqaaidqingklnrliektn
dkyhqiekefeqvegriqdlekyvedtkidlwsynaellvalenqhtidvtdsemnklfe
rvrrqlrenaedkgngcfeifhkcdnnciesirngtydhdiyrdeainnrfq

SCOPe Domain Coordinates for d5xl1c_:

Click to download the PDB-style file with coordinates for d5xl1c_.
(The format of our PDB-style files is described here.)

Timeline for d5xl1c_:

  • d5xl1c_ appears in periodic updates to SCOPe 2.06 starting on 2017-08-03