SCOP 1.61: Domain d1qqca1: 1qqc A:1-347

Lineage for d1qqca1 (1qqc A:1-347)

1. Root: SCOP 1.61

2. Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)

4. Superfamily c.55.3: Ribonuclease H-like [53098] (7 families)

5. Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (4 proteins)

6. Protein Exonuclease domain of family B (archaeal and phage) DNA polymerases [53125] (6 species)

7. Species Archaeon Desulfurococcus tok [TaxId:108142] [53130] (2 PDB entries)

8. Domain d1qqca1: 1qqc A:1-347 [33724]
   Other proteins in same PDB: d1qqca2

Details for d1qqca1

PDB Entry: 1qqc, 2.6 Å

PDB Description: crystal structure of an archaebacterial dna polymerase d.tok

SCOP Domain Sequences for d1qqca1:

Sequence; same for both SEQRES and ATOM records:

>d1qqca1 c.55.3.5 (A:1-347) Exonuclease domain of family B (archaeal and phage) DNA polymerases {Archaeon Desulfurococcus tok}
mildadyitedgkpvirvfkkekgefkidydrdfepyiyallkddsaiedikkitaerhg
ttvrvtraervkkkflgrpvevwklyfthpqdvpairdkirehpavvdiyeydipfakry
lidrglipmegdeelrmlafdietlyhegeefgegpilmisyadeegarvitwknidlpy
vesvstekemikrflkviqekdpdvlityngdnfdfaylkkrsemlgvkfilgrdgsepk
iqrmgdrfavevkgrihfdlypvirrtinlptytletvyepvfgqpkekvyaeeiarawe
sgeglervarysmedakatyelgkeffpmeaqlsrlvgqslwdvsrs

Timeline for d1qqca1:

• d1qqca1 first appeared (with stable ids) in SCOP 1.55
  
• d1qqca1 appears in SCOP 1.59
  
• d1qqca1 appears in SCOP 1.63
  
• d1qqca1 appears in the current release, SCOPe 2.08