Lineage for d5lhvd_ (5lhv D:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2125386Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2125403Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families) (S)
    complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
  5. 2125404Family c.56.2.1: Purine and uridine phosphorylases [53168] (7 protein domains)
  6. 2125805Protein Uridine phosphorylase [53176] (6 species)
  7. 2126047Species Vibrio cholerae [TaxId:243277] [224899] (13 PDB entries)
  8. 2293910Domain d5lhvd_: 5lhv D: [337211]
    automated match to d4k6oc_
    complexed with cl, gol, mg, na, so4, ura, uri

Details for d5lhvd_

PDB Entry: 5lhv (more details), 1.29 Å

PDB Description: x-ray structure of uridine phosphorylase from vibrio cholerae in complex with uridine and sulfate ion at 1.29 a resolution
PDB Compounds: (D:) Uridine phosphorylase

SCOPe Domain Sequences for d5lhvd_:

Sequence, based on SEQRES records: (download)

>d5lhvd_ c.56.2.1 (D:) Uridine phosphorylase {Vibrio cholerae [TaxId: 243277]}
ktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqsvv
vcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgaslhf
apmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfqgs
mkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketearsik
vvveaarkmlk

Sequence, based on observed residues (ATOM records): (download)

>d5lhvd_ c.56.2.1 (D:) Uridine phosphorylase {Vibrio cholerae [TaxId: 243277]}
ktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqsvv
vcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgaslhf
apmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfqgs
mkewqdmgvlnfemesatlltmcassglkagcvagviinrtqpdhatlketearsikvvv
eaarkmlk

SCOPe Domain Coordinates for d5lhvd_:

Click to download the PDB-style file with coordinates for d5lhvd_.
(The format of our PDB-style files is described here.)

Timeline for d5lhvd_:

  • d5lhvd_ appears in periodic updates to SCOPe 2.06 starting on 2017-08-03