Lineage for d5w6va1 (5w6v A:21-410)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2045654Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2047718Superfamily b.34.14: PAZ domain [101690] (2 families) (S)
  5. 2047758Family b.34.14.0: automated matches [310679] (1 protein)
    not a true family
  6. 2047759Protein automated matches [310889] (1 species)
    not a true protein
  7. 2047760Species Human (Homo sapiens) [TaxId:9606] [311392] (4 PDB entries)
  8. 2293834Domain d5w6va1: 5w6v A:21-410 [337135]
    Other proteins in same PDB: d5w6va2, d5w6va3
    automated match to d4krea1
    protein/RNA complex

Details for d5w6va1

PDB Entry: 5w6v (more details), 2.83 Å

PDB Description: the structure of human argonaute-1 in complex with the hook motif of human gw182
PDB Compounds: (A:) Protein argonaute-1

SCOPe Domain Sequences for d5w6va1:

Sequence, based on SEQRES records: (download)

>d5w6va1 b.34.14.0 (A:21-410) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fqaprrpgigtvgkpikllanyfevdipkidvyhyevdikpdkcprrvnrevveymvqhf
kpqifgdrkpvydgkkniytvtalpignervdfevtipgegkdrifkvsikwlaivswrm
lhealvsgqipvplesvqaldvamrhlasmrytpvgrsffsppegyyhplgggrevwfgf
hqsvrpamwkmmlnidvsatafykaqpviefmcevldirnideqpkpltdsqrvrftkei
kglkvevthcgqmkrkyrvcnvtrrpashqtfplqlesgqtvectvaqyfkqkynlqlky
phlpclqvgqeqkhtylplevcnivagqrcikkltdnqtstmikatarsapdrqeeisrl
mknasynldpyiqefgikvkddmtevtgrv

Sequence, based on observed residues (ATOM records): (download)

>d5w6va1 b.34.14.0 (A:21-410) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fqaprrpgigtvgkpikllanyfevdipkidvyhyevdikpdkcprrvnrevveymvqhf
kpqifgdrkpvydgkkniytvtalpignervdfevtipgkdrifkvsikwlaivswrmlh
ealvsgqipvplesvqaldvamrhlasmrytpvgrsffsppegyyhplgggrevwfgfhq
svrpamwkmmlnidvsatafykaqpviefmcevldirnqpkpltdsqrvrftkeikglkv
evthckrkyrvcnvtrrpashqtfpectvaqyfkqkynlqlkyphlpclqvqkhtylple
vcnivagqrcikkltdnqtstmikatarsapdrqeeisrlmknasynldpyiqefgikvk
ddmtevtgrv

SCOPe Domain Coordinates for d5w6va1:

Click to download the PDB-style file with coordinates for d5w6va1.
(The format of our PDB-style files is described here.)

Timeline for d5w6va1:

  • d5w6va1 appears in periodic updates to SCOPe 2.06 starting on 2017-07-27