SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5n9wa_ (5n9w A:)

  1. Root: SCOPe 2.06
  2. 2217451Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)
  3. 2222543Fold e.23: Acetyl-CoA synthetase-like [56800] (1 superfamily)
    4 domains: (1&2) duplication: share the same alpha/beta fold; (3) beta-barrel; (4) alpha+beta
  4. 2222544Superfamily e.23.1: Acetyl-CoA synthetase-like [56801] (2 families) (S)
  5. 2222620Family e.23.1.0: automated matches [191594] (1 protein)
    not a true family
  6. 2222621Protein automated matches [191083] (22 species)
    not a true protein
  7. 2222726Species Streptomyces sp. [TaxId:1931] [256140] (7 PDB entries)
  8. 2293818Domain d5n9wa_: 5n9w A: [337119]
    automated match to d3dhva_
    complexed with act

Details for d5n9wa_

PDB Entry: 5n9w (more details), 2.46 Å

PDB Description: structure of adenylation domain thr1 involved in the biosynthesis of 4-chlorothreonine in streptomyces sp.oh-5093, apo structure
PDB Compounds: (A:) adenylation domain

SCOPe Domain Sequences for d5n9wa_:

Sequence, based on SEQRES records: (download)

>d5n9wa_ e.23.1.0 (A:) automated matches {Streptomyces sp. [TaxId: 1931]}
atlvdlfsraamempdrtalhiddekisygllhswaegladllhdagvrkgdrvalrmpp
ganaiaamlgilragaayvpldirnpparnafivtdsqvvalvgdpgdipeytgplvtee
nvaalrdreaikdpgperpgpqdvayiiytsgttgrpkgvpvrhgnvtalfeacsrlfsf
saddrwllfhsmafdfsvweiwgalstgaelvvlpywtartpvetarvvrdrgitvlnqt
ptafgalttavlgegidlpelryvvfggekltpavvrpwakrfgldrphlinmygitett
vhatfhrlteddlaaedsvigrplpgfthrivtedgrdaatgepgelwlagpqvsegyln
rpeltaerfttgpardggapppryyhsgdlvsrraggdlvyqgradlqvklrghrielsd
veaavrthpavvdavvwvhefapgdsrlvcaytaqaseegtgpdaralrahvktvlpsym
qpsqylalpelprtingkadrasvarafderr

Sequence, based on observed residues (ATOM records): (download)

>d5n9wa_ e.23.1.0 (A:) automated matches {Streptomyces sp. [TaxId: 1931]}
atlvdlfsraamempdrtalhiddekisygllhswaegladllhdagvrkgdrvalrmpp
ganaiaamlgilragaayvpldirnpparnafivtdsqvvalvgdpgytgplvteenvaa
lrdrgperpgpqdvayiiytsgrpkgvpvrhgnvtalfeacsrlfsfsaddrwllfhsma
fdfsvweiwgalstgaelvvltpvetarvvrdrgitvlnqtptafgalttavlgegidlp
elryvvfggekltpavvrpwakrfgldrphlinmygitettvhatfhrlteddlaaedsv
igrplpgfthrivtedgrdaatgepgelwlagpqvsegylnrpeltaerfttppryyhsg
dlvsrraggdlvyqgradlqvklrghrielsdveaavrthpavvdavvwvhefapgdsrl
vcaytaqpdaralrahvktvlpsymqpsqylalpelprtingkadrasvarafderr

SCOPe Domain Coordinates for d5n9wa_:

Click to download the PDB-style file with coordinates for d5n9wa_.
(The format of our PDB-style files is described here.)

Timeline for d5n9wa_:

  • d5n9wa_ appears in periodic updates to SCOPe 2.06 starting on 2017-07-27