Lineage for d5tudb1 (5tud B:1-105)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2026644Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2026645Protein automated matches [190740] (27 species)
    not a true protein
  7. 2028399Species Mouse (Mus musculus) [TaxId:10090] [188198] (563 PDB entries)
  8. 2293766Domain d5tudb1: 5tud B:1-105 [337067]
    Other proteins in same PDB: d5tudb2, d5tude2
    automated match to d1dn0a1
    complexed with erm

Details for d5tudb1

PDB Entry: 5tud (more details), 3 Å

PDB Description: structural insights into the extracellular recognition of the human serotonin 2b receptor by an antibody
PDB Compounds: (B:) Anti-5-HT2B Fab light chain

SCOPe Domain Sequences for d5tudb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5tudb1 b.1.1.0 (B:1-105) automated matches {Mus musculus [TaxId: 10090]}
divliqspaimsaspgekvtitcsasssvsymhwfqqkpgtspklwiystsnlasgvpar
fsgsgsgtsysltisrmeaedaatyycqqrssypltfgagtklei

SCOPe Domain Coordinates for d5tudb1:

Click to download the PDB-style file with coordinates for d5tudb1.
(The format of our PDB-style files is described here.)

Timeline for d5tudb1:

  • d5tudb1 appears in periodic updates to SCOPe 2.06 starting on 2017-07-27

View in 3D
Domains from same chain:
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d5tudb2