Lineage for d5nf5a_ (5nf5 A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2145531Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2145532Protein automated matches [190039] (140 species)
    not a true protein
  7. 2145930Species Norway rat (Rattus norvegicus) [TaxId:10116] [186759] (101 PDB entries)
  8. 2293740Domain d5nf5a_: 5nf5 A: [337041]
    automated match to d4mf3a_
    complexed with 8vn, cl, gol, so4

Details for d5nf5a_

PDB Entry: 5nf5 (more details), 2.85 Å

PDB Description: structure of gluk1 ligand-binding domain (s1s2) in complex with cip-as at 2.85 a resolution
PDB Compounds: (A:) Glutamate receptor ionotropic, kainate 1,Glutamate receptor ionotropic, kainate 1

SCOPe Domain Sequences for d5nf5a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5nf5a_ c.94.1.0 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}

SCOPe Domain Coordinates for d5nf5a_:

Click to download the PDB-style file with coordinates for d5nf5a_.
(The format of our PDB-style files is described here.)

Timeline for d5nf5a_:

  • d5nf5a_ appears in periodic updates to SCOPe 2.06 starting on 2017-07-27