Lineage for d5ksid_ (5ksi D:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1976410Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1976411Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1976488Family a.1.1.2: Globins [46463] (27 protein domains)
    Heme-binding protein
  6. 1977385Protein Hemoglobin, beta-chain [46500] (25 species)
  7. 1977509Species Human (Homo sapiens) [TaxId:9606] [46501] (241 PDB entries)
    Uniprot P68871
  8. 2293707Domain d5ksid_: 5ksi D: [337008]
    Other proteins in same PDB: d5ksia_, d5ksic_
    automated match to d1irdb_
    complexed with dg2, hem, s1p

Details for d5ksid_

PDB Entry: 5ksi (more details), 1.8 Å

PDB Description: crystal structure of deoxygenated hemoglobin in complex with sphingosine phosphate and 2,3-bisphosphoglycerate
PDB Compounds: (D:) Hemoglobin subunit beta

SCOPe Domain Sequences for d5ksid_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ksid_ a.1.1.2 (D:) Hemoglobin, beta-chain {Human (Homo sapiens) [TaxId: 9606]}
vhltpeeksavtalwgkvnvdevggealgrllvvypwtqrffesfgdlstpdavmgnpkv
kahgkkvlgafsdglahldnlkgtfatlselhcdklhvdpenfrllgnvlvcvlahhfgk
eftppvqaayqkvvagvanalahkyh

SCOPe Domain Coordinates for d5ksid_:

Click to download the PDB-style file with coordinates for d5ksid_.
(The format of our PDB-style files is described here.)

Timeline for d5ksid_:

  • d5ksid_ appears in periodic updates to SCOPe 2.06 starting on 2017-07-27