Lineage for d5vyba1 (5vyb A:64-209)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2558905Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. 2558906Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. 2559681Family d.169.1.0: automated matches [191331] (1 protein)
    not a true family
  6. 2559682Protein automated matches [190159] (17 species)
    not a true protein
  7. 2559734Species Human (Homo sapiens) [TaxId:9606] [186882] (84 PDB entries)
  8. 2559944Domain d5vyba1: 5vyb A:64-209 [336513]
    Other proteins in same PDB: d5vyba2
    automated match to d4zesa_
    complexed with bma, ca, man, na, peg

Details for d5vyba1

PDB Entry: 5vyb (more details), 2.4 Å

PDB Description: structure of the carbohydrate recognition domain of dectin-2 complexed with a mammalian-type high mannose man9glcnac2 oligosaccharide
PDB Compounds: (A:) C-type lectin domain family 6 member A

SCOPe Domain Sequences for d5vyba1:

Sequence, based on SEQRES records: (download)

>d5vyba1 d.169.1.0 (A:64-209) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ltcfsegtkvpawgccpaswksfgsscyfisseekvwskseqncvemgahlvvfnteaeq
nfivqqlnesfsyflglsdpqgnnnwqwidktpyeknvrfwhlgepnhsaeqcasivfwk
ptgwgwndvicetrrnsicemnkiyl

Sequence, based on observed residues (ATOM records): (download)

>d5vyba1 d.169.1.0 (A:64-209) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ltcfsegawgccpaswksfgsscyfisseekvwskseqncvemgahlvvfnteaeqnfiv
qqlnesfsyflglsdpqgnnnwqwidktpyeknvrfwhlgepnhsaeqcasivfwkptgw
gwndvicetrrnsicemnkiyl

SCOPe Domain Coordinates for d5vyba1:

Click to download the PDB-style file with coordinates for d5vyba1.
(The format of our PDB-style files is described here.)

Timeline for d5vyba1:

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Domains from same chain:
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d5vyba2