Lineage for d1rtha1 (1rth A:430-543)

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 995076Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 995888Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 995889Family c.55.3.1: Ribonuclease H [53099] (5 proteins)
  6. 995925Protein HIV RNase H (Domain of reverse transcriptase) [53105] (2 species)
  7. 995926Species Human immunodeficiency virus type 1 [TaxId:11676] [53106] (85 PDB entries)
    Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595
  8. 995930Domain d1rtha1: 1rth A:430-543 [33576]
    Other proteins in same PDB: d1rtha2, d1rthb1
    complexed with u05

Details for d1rtha1

PDB Entry: 1rth (more details), 2.2 Å

PDB Description: high resolution structures of hiv-1 rt from four rt-inhibitor complexes
PDB Compounds: (A:) hiv-1 reverse transcriptase

SCOPe Domain Sequences for d1rtha1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rtha1 c.55.3.1 (A:430-543) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1 [TaxId: 11676]}
ekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqaiylalqds
glevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgig

SCOPe Domain Coordinates for d1rtha1:

Click to download the PDB-style file with coordinates for d1rtha1.
(The format of our PDB-style files is described here.)

Timeline for d1rtha1:

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Domains from same chain:
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d1rtha2
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Domains from other chains:
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d1rthb1