Lineage for d5t0db_ (5t0d B:)

  1. Root: SCOPe 2.06
  2. 2237529Class h: Coiled coil proteins [57942] (7 folds)
  3. 2238933Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
    core: trimeric coiled coil
  4. 2238934Superfamily h.3.1: Influenza hemagglutinin (stalk) [58064] (2 families) (S)
  5. 2238935Family h.3.1.1: Influenza hemagglutinin (stalk) [58065] (2 protein domains)
  6. 2238936Protein Influenza hemagglutinin (stalk) [58066] (11 species)
    trimer
  7. 2238958Species Influenza A virus, different strains [TaxId:11320] [58067] (127 PDB entries)
  8. 2292199Domain d5t0db_: 5t0d B: [335500]
    Other proteins in same PDB: d5t0da_, d5t0dc_, d5t0de_
    automated match to d4kdmb_
    complexed with gal, nag, sia; mutant

Details for d5t0db_

PDB Entry: 5t0d (more details), 2.86 Å

PDB Description: crystal structure of h6 hemagglutinin g225d mutant from taiwan (2013) h6n1 influenza virus in complex with 3'-sln
PDB Compounds: (B:) Hemagglutinin HA2 chain

SCOPe Domain Sequences for d5t0db_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5t0db_ h.3.1.1 (B:) Influenza hemagglutinin (stalk) {Influenza A virus, different strains [TaxId: 11320]}
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgi

SCOPe Domain Coordinates for d5t0db_:

Click to download the PDB-style file with coordinates for d5t0db_.
(The format of our PDB-style files is described here.)

Timeline for d5t0db_:

  • d5t0db_ appears in periodic updates to SCOPe 2.06 starting on 2017-06-15