SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Burkholderia ambifaria [TaxId: 398577]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2134062Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
  4. 2134063Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families) (S)
    many members have left-handed crossover connection between strand 8 and additional strand 9
  5. 2136079Family c.69.1.0: automated matches [191404] (1 protein)
    not a true family
  6. 2136080Protein automated matches [190543] (82 species)
    not a true protein
  7. 2292196Species Burkholderia ambifaria [TaxId:398577] [335497] (1 PDB entry)

PDB entry in Species: Burkholderia ambifaria [TaxId: 398577]:

More info for Species Burkholderia ambifaria [TaxId:398577] from c.69.1.0 automated matches

Timeline for Species Burkholderia ambifaria [TaxId:398577] from c.69.1.0 automated matches:

  • Species Burkholderia ambifaria [TaxId:398577] from c.69.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-06-15