Lineage for d5tjka1 (5tjk A:64-345)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2133075Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2133076Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2133477Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 protein domains)
    automatically mapped to Pfam PF03414
  6. 2133594Protein automated matches [190178] (2 species)
    not a true protein
  7. 2133601Species Human (Homo sapiens) [TaxId:9606] [186910] (70 PDB entries)
  8. 2292148Domain d5tjka1: 5tjk A:64-345 [335449]
    Other proteins in same PDB: d5tjka2
    automated match to d3zgfa_
    complexed with bga, gol

Details for d5tjka1

PDB Entry: 5tjk (more details)

PDB Description: crystal structure of gta + a trisaccharide (native)
PDB Compounds: (A:) Histo-blood group ABO system transferase

SCOPe Domain Sequences for d5tjka1:

Sequence, based on SEQRES records: (download)

>d5tjka1 c.68.1.9 (A:64-345) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevraykrwqd
vsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpgfygssrea
ftyerrpqsqayipkdegdfyylggffggsvqevqrltrachqammvdqangieavwhde
shlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavp

Sequence, based on observed residues (ATOM records): (download)

>d5tjka1 c.68.1.9 (A:64-345) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevrrwqdvsm
rrmemisfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpgfygssreaftye
rrpqsqayipkdegdfyylggffggsvqevqrltrachqammvdqangieavwhdeshln
kyllrhkptkvlspeylwdqqllgwpavlrklrftavp

SCOPe Domain Coordinates for d5tjka1:

Click to download the PDB-style file with coordinates for d5tjka1.
(The format of our PDB-style files is described here.)

Timeline for d5tjka1:

  • d5tjka1 appears in periodic updates to SCOPe 2.06 starting on 2017-06-15

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d5tjka2