Lineage for Species: Foot-and-mouth disease virus - type o [TaxId: 12118]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2075627Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 protein domains)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2075905Protein automated matches [190854] (14 species)
    not a true protein
  7. 2292138Species Foot-and-mouth disease virus - type o [TaxId:12118] [335439] (2 PDB entries)

PDB entries in Species: Foot-and-mouth disease virus - type o [TaxId: 12118]:

  1. Domain(s) for 5ne4:
  2. Domain(s) for 5nem:
    1. 2292384Domain d5nem3_: 5nem 3: [335685]
      Other proteins in same PDB: d5nema1, d5nema2
      automated match to d1qqp3_
      complexed with ca, man, nag
    2. 2292465Domain d5nem1_: 5nem 1: [335766]
      Other proteins in same PDB: d5nema1, d5nema2
      automated match to d1qqp1_
      complexed with ca, man, nag

More info for Species Foot-and-mouth disease virus - type o [TaxId:12118] from b.121.4.1 automated matches

Timeline for Species Foot-and-mouth disease virus - type o [TaxId:12118] from b.121.4.1 automated matches:

  • Species Foot-and-mouth disease virus - type o [TaxId:12118] from b.121.4.1 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-06-15