SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Mus musculus [TaxId: 10090]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2038038Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 2038039Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (3 families) (S)
    two constituent families are related by circular permutation
  5. 2038183Family b.7.1.2: Synaptotagmin-like (S variant) [49575] (11 protein domains)
    topologically similar to the C-terminal domain of PapD
  6. 2038208Protein Synaptogamin I [49576] (3 species)
    duplication: contains tandem repeat of two similar domains
  7. 2292135Species Mus musculus [TaxId:10090] [335436] (1 PDB entry)

PDB entry in Species: Mus musculus [TaxId: 10090]:

More info for Species Mus musculus [TaxId:10090] from b.7.1.2 Synaptogamin I

Timeline for Species Mus musculus [TaxId:10090] from b.7.1.2 Synaptogamin I:

  • Species Mus musculus [TaxId:10090] from b.7.1.2 Synaptogamin I appears in periodic updates to SCOPe 2.06 starting on 2017-06-15