SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Methanothermococcus thermolithotrophicus [TaxId: 523845]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2177144Superfamily d.58.31: Methyl-coenzyme M reductase subunits [55088] (3 families) (S)
    each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures
  5. 2177239Family d.58.31.0: automated matches [227271] (1 protein)
    not a true family
  6. 2177240Protein automated matches [227074] (4 species)
    not a true protein
  7. 2292100Species Methanothermococcus thermolithotrophicus [TaxId:523845] [335401] (1 PDB entry)

PDB entry in Species: Methanothermococcus thermolithotrophicus [TaxId: 523845]:

More info for Species Methanothermococcus thermolithotrophicus [TaxId:523845] from d.58.31.0 automated matches

Timeline for Species Methanothermococcus thermolithotrophicus [TaxId:523845] from d.58.31.0 automated matches:

  • Species Methanothermococcus thermolithotrophicus [TaxId:523845] from d.58.31.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-06-15