Lineage for d5iiba_ (5iib A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1986373Fold a.19: Fertilization protein [47081] (1 superfamily)
    core: 3 helices; bundle, closed, right-handed twist; up-and-down
  4. 1986374Superfamily a.19.1: Fertilization protein [47082] (1 family) (S)
    automatically mapped to Pfam PF01303
  5. 1986375Family a.19.1.1: Fertilization protein [47083] (3 protein domains)
  6. 1986376Protein Lysin [47084] (2 species)
  7. 1986380Species Red abalone (Haliotis rufescens) [TaxId:6454] [47085] (6 PDB entries)
  8. 2292097Domain d5iiba_: 5iib A: [335398]
    automated match to d2lisa_
    complexed with epe, nag, suc

Details for d5iiba_

PDB Entry: 5iib (more details), 1.64 Å

PDB Description: crystal structure of red abalone egg verl repeat 3 in complex with sperm lysin at 1.64 a resolution (crystal form ii)
PDB Compounds: (A:) Egg-lysin

SCOPe Domain Sequences for d5iiba_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5iiba_ a.19.1.1 (A:) Lysin {Red abalone (Haliotis rufescens) [TaxId: 6454]}
flnkafevalkvqiiagfdrglvkwlrvhgrtlstvqkkalyfvnrrymqthwanymlwi
nkkidalgrtpvvgdytrlgaeigrridmayfydflkdknmipkylpymeeinrmrpadv
pvky

SCOPe Domain Coordinates for d5iiba_:

Click to download the PDB-style file with coordinates for d5iiba_.
(The format of our PDB-style files is described here.)

Timeline for d5iiba_:

  • d5iiba_ appears in periodic updates to SCOPe 2.06 starting on 2017-06-15