SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Thermus thermophilus [TaxId: 274]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2128255Fold c.61: PRTase-like [53270] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
  4. 2128256Superfamily c.61.1: PRTase-like [53271] (3 families) (S)
  5. 2128696Family c.61.1.0: automated matches [191528] (1 protein)
    not a true family
  6. 2128697Protein automated matches [190891] (32 species)
    not a true protein
  7. 2292094Species Thermus thermophilus [TaxId:274] [335395] (1 PDB entry)

PDB entry in Species: Thermus thermophilus [TaxId: 274]:

More info for Species Thermus thermophilus [TaxId:274] from c.61.1.0 automated matches

Timeline for Species Thermus thermophilus [TaxId:274] from c.61.1.0 automated matches:

  • Species Thermus thermophilus [TaxId:274] from c.61.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-06-15