SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Haliotis rufescens [TaxId: 6454]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1986373Fold a.19: Fertilization protein [47081] (1 superfamily)
    core: 3 helices; bundle, closed, right-handed twist; up-and-down
  4. 1986374Superfamily a.19.1: Fertilization protein [47082] (1 family) (S)
    automatically mapped to Pfam PF01303
  5. 1986375Family a.19.1.1: Fertilization protein [47083] (3 protein domains)
  6. 2292046Protein automated matches [335347] (1 species)
    not a true protein
  7. 2292047Species Haliotis rufescens [TaxId:6454] [335348] (4 PDB entries)

PDB entries in Species: Haliotis rufescens [TaxId: 6454]:

  1. Domain(s) for 5ii7:
  2. Domain(s) for 5ii8:
  3. Domain(s) for 5ii9:
    1. 2292048Domain d5ii9a_: 5ii9 A: [335349]
      automated match to d2lisa_
    2. 2292050Domain d5ii9f_: 5ii9 F: [335351]
      automated match to d2lisa_
    3. 2292051Domain d5ii9b_: 5ii9 B: [335352]
      automated match to d2lisa_
    4. 2292078Domain d5ii9e_: 5ii9 E: [335379]
      automated match to d2lisa_
    5. 2292081Domain d5ii9c_: 5ii9 C: [335382]
      automated match to d2lisa_
    6. 2292098Domain d5ii9d_: 5ii9 D: [335399]
      automated match to d2lisa_
  4. Domain(s) for 5mr3:
    1. 2292079Domain d5mr3a_: 5mr3 A: [335380]
      automated match to d2lisa_
      complexed with cl, gol, nag, pge
    2. 2292099Domain d5mr3e_: 5mr3 E: [335400]
      automated match to d2lisa_
      complexed with cl, gol, nag, pge
    3. 2292105Domain d5mr3g_: 5mr3 G: [335406]
      automated match to d2lisa_
      complexed with cl, gol, nag, pge

More info for Species Haliotis rufescens [TaxId:6454] from a.19.1.1 automated matches

Timeline for Species Haliotis rufescens [TaxId:6454] from a.19.1.1 automated matches:

  • Species Haliotis rufescens [TaxId:6454] from a.19.1.1 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-06-15