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Lineage for d5b89b1 (5b89 B:1-397)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2130990Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2130991Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2132229Family c.67.1.0: automated matches [191328] (1 protein)
    not a true family
  6. 2132230Protein automated matches [190151] (118 species)
    not a true protein
  7. 2292025Species Thermococcus onnurineus [TaxId:523850] [335326] (4 PDB entries)
  8. 2292029Domain d5b89b1: 5b89 B:1-397 [335330]
    Other proteins in same PDB: d5b89a2, d5b89b2
    automated match to d1jf9a_
    complexed with ala, edo, gol, plp

Details for d5b89b1

PDB Entry: 5b89 (more details), 1.5 Å

PDB Description: crystal structure of a cysteine desulfurase from thermococcus onnurineus na1 in complex with alanine at 1.5 angstrom resolution
PDB Compounds: (B:) Cysteine desulfurase

SCOPe Domain Sequences for d5b89b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5b89b1 c.67.1.0 (B:1-397) automated matches {Thermococcus onnurineus [TaxId: 523850]}
mripedvrkdipltneviyfdntatsltpkpvveamdeyylkyranvhrgvhrlsqmath
kyeesrkivadfigakfeeivftkntseslnlvalglghifkrgdkivttpyehhsdllp
wqrlatklglklefiegddegnldlsdaekkikgaklvavqhvsnalgviheveelgkia
kdegaifvvdaaqsaghmevnvkklhadflafsghkgpmgptgigvlyireeffdtfepp
ligggtiedvsldgykltepperfeagtpniggaiglaagiryieriglgrierqehklv
krttegldelevpwygprnlkkhagvvsfnvpglhphdvaailddhsimvrsghhcalpv
mkklgingtvrasfhvynsleevetflgvmeelvkgl

SCOPe Domain Coordinates for d5b89b1:

Click to download the PDB-style file with coordinates for d5b89b1.
(The format of our PDB-style files is described here.)

Timeline for d5b89b1:

  • d5b89b1 appears in periodic updates to SCOPe 2.06 starting on 2017-06-15

View in 3D
Domains from same chain:
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d5b89b2